BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003F11LP1|AL425163
(1014 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig297 1869 0.0
>3x_Contig297
Length = 1346
Score = 1869 bits (942), Expect = 0.0
Identities = 996/1012 (98%), Gaps = 2/1012 (0%)
Strand = Plus / Plus
Query: 1 gatcaatgcgtaattgtagggcggatagaattgggttttgtgagactccagaaacgtcac 60
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 33 gatcaatgcgtaattatagggcggatagaattgggttttgtaagactccagaaacgtcac 92
Query: 61 actagtataagaattgcaagttttctaacaagttagtcaacttctcaattagaagcaact 120
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 93 actagtataaaaattgcaagtattctaacaagttagtcaacttctcaattagaagcaact 152
Query: 121 attctcagagtaaacaagatatccctctgttgaacgcaaactcttagtgaagcatttacg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 attctcagagtaaacaagatatccctctgttgaacgcaaactcttagtgaagcatttaca 212
Query: 181 agtacatactcatcagagaagatatgtcgcacgacccaaatcaacaacagccgcatggtg 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 213 agtacatactcatcagagaagatatgtcgcacgacccaaattaacaacagccgcatggtg 272
Query: 241 gctcaggtcaaggccatcaccaacgccagctgactaaccacgcacaaggccaacatatcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gctcaggtcaaggccatcaccaacgccagctgactaaccacgcacaaggccaacatatcg 332
Query: 301 gtaagtatcaaatcatcaagaccttgggtgaaggatcatttggtaaagtgaaactggcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtaagtatcaaatcatcaagaccttgggtgaaggatcatttggtaaagtgaaactggcgt 392
Query: 361 accatatctctacgggacaaaaagtggcattaaaaatcatcaataagaaggttctagcca 420
||||||||| ||||||||||||||||||||||||||| || |||||||||||| ||||||
Sbjct: 393 accatatctgtacgggacaaaaagtggcattaaaaattattaataagaaggttttagcca 452
Query: 421 agagtgatatgcaaggtagaatcgagagagagatttcgtacttacgtttgttgagacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agagtgatatgcaaggtagaatcgagagagagatttcgtacttacgtttgttgagacatc 512
Query: 481 cacacattatcaaattgtatgacgtgatcaaatcgaaggacgaaattatcatggtgattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cacacattatcaaattgtatgacgtgatcaaatcgaaggacgaaattatcatggtgattg 572
Query: 541 agtatgctggtaatgaattatttgattatattgtccaaagagacaagatgcctgaacaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 agtatgctggtaatgaattatttgattatattgtccaaagagacaagatgcctgaacaag 632
Query: 601 aagcaagaagatttttccaacagattattagcgcagtagattattgtcaccgtcataaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aagcaagaagatttttccaacagattattagcgcagtagattattgtcaccgtcataaaa 692
Query: 661 ttgtgcatagagatttgaaaccagagaatttactattagacgaacatttgaacgttaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ttgtgcatagagatttgaaaccagagaatttactattagacgaacatttgaacgttaaga 752
Query: 721 ttgctgattttggtttatctaatataatgacagatggtaactttttgaagacttcatgtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ttgctgattttggtttatctaatataatgacagatggtaactttttgaagacttcatgtg 812
Query: 781 gttctccaaatttatgcggccccagaagtcatcagcggtaaactatatgcaggtccagag 840
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gttctccaaa-ttatgcggccccagaagtcatcagcggtaaactatatgcaggtccagag 871
Query: 841 gttgacgtttggtcttcaggggttatcttatacgtcatgttgtgtcgtaggttaccattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gttgacgtttggtcttcaggggttatcttatacgtcatgttgtgtcgtaggttaccattc 931
Query: 901 gatgacgaaaagtatcccagtgttgtttaagaacattagcaatggtgtttacacataacc 960
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 932 gatgacg-aaagtatcccagtgttgtttaagaacattagcaatggtgtttacaccatacc 990
Query: 961 taacttcctttcccaaggtgctgcgagcttaatcaaaaagatgcycatcgtc 1012
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 991 taacttcctttcccaaggtgctgcgagcttaatcaaaaagatgctcatcgtc 1042
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7272
Number of Sequences: 1807
Number of extensions: 7272
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 1014
length of database: 10,358,551
effective HSP length: 16
effective length of query: 998
effective length of database: 10,329,639
effective search space: 10308979722
effective search space used: 10308979722
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)